Real-time
monitoring of COVID-19 dynamics using automated trend
fitting and anomaly detection (2021), Jombart T,
Ghozzi S, Schumacher D, Taylor TJ, Leclerc QJ, Jit M,
Flasche S, Greaves F, Ward T, Eggo RM, Nightingale E,
Meakin S, Brady OJ, Centre for Mathematical Modelling of
Infectious Diseases COVID-19 Working Group, Medley GF, Höhle
M, Edmunds JW. Royal Society Philosophical Transactions
B, 376:
20200266.
OutbreakTools:
a new platform for disease outbreak analysis using the R
software (2014), Jombart T, David Aanensen D, Baguelin
M, Birrell P, Cauchemez S, Camacho A, Colijn C, Collins C,
Cori A, Didelot X, Fraser C, Frost S, Hens N, Hugues J,
Höhle M, Opatowski L, Rambaut A, Ratmann O, Soubeyrand S,
Suchard MA, Wallinga J, Ypma R, Ferguson. Epidemiology
7:28-34.
Global
Mortality Estimates for the 2009 Influenza Pandemic from
the GLaMOR Project: A Modeling Study (2013), Simonsen
L, Spreeuwenberg, Lustig R, Taylor RJ, Fleming DM, Kroneman
M, Van Kerkhove MD, Mounts AW, Paget WJ and the GLaMOR
Collaborating Teams, PLoS Medicine, 10(11):
e1001558. Note: I'm not a direct author of the publication, but
was member of the German GLaMOR team responsible for the
extraction and interpretation of the data from the official
German mortality statistics.
German
Outbreak of Escherichia coli O104:H4 Associated with
Sprouts (2011), Buchholz U, Bernard H, Werber D,
Böhmer MM, Remschmidt C, Wilking H, Deleré Y, a. d. Heiden
M, Adlhoch C, Dreesman J, Ehlers J, Ethelberg S, Faber M,
Frank C, Fricke G, Greiner M, Höhle M, Ivarsson S, Jark U,
Kirchner M, Koch J, Krause G, Luber P, Rosner B, Stark K,
Kühne M. New England Journal of Medicine,
365:1763-1770.
Learning Programs in Photogrammetry for the Internet
(1996), Höhle J, Höhle M. The Photogrammetric Journal of
Finland, No.1, Vol.15, pp. 30–39.
Books and Chapters in Books
Prospective Detection of Outbreaks (2017), Allévius
B and Höhle M, Book Chapter in the upcoming Handbook of
Infectious Disease Epidemiology, Held, L., Hens, N.,
O’Neill, P.D. and Wallinga, J. (Eds.). CRC Press., CRC
Press. [preprint]
Infectious Disease Modelling (2016), Höhle M, Book
Chapter in the Handbook
on Spatial Epidemiology. A. Lawson, S. Banerjee, R.
Haining and L. Ugarte (Eds.), CRC Press. [preprint]
Aberration detection in
R illustrated by Danish mortality monitoring
(2010), Höhle M and Mazick A, Book chapter in T.
Kass-Hout T and X. Zhang (Eds.) Biosurveillance: Methods and Case Studies,
CRC Press, pp. 215-238. [preprint] Remarks: The R-code
in the paper is available using the call demo("biosurvinr").
Furthermore, the function sr mentioned in the paper has been
renamed to stcd.
In discussion
of the article "An explicit link between Gaussian fields and
Gaussian Markov random fields: the stochastic partial
differential equation approach" by F. Lindgren, H. Rue and
J. Lindström (2011), Journal of the Royal Statistical
Society, Series B, 73(4), p. 475.
Contributions to on-line discussion (no peer review)
Online
Comment on the paper 'A Likelihood-Based Approach to
Identifying Contaminated Food Products Using Sales Data:
Performance and Challenges'by Kaufman et al.
(2014), PLoS Comput Biol 10(7): e1003692.
Blog like Technical Notes (no peer
review, but directly commentable by the community, announced
over twitter
& R-Bloggers)